In VS 2012, this wizard was called the "Identity and Access Tool"
In VS 2013, there was - oh that's right - nothing!
But, fear not, there is a way.
Using VS 2013 Update 2:
- Create an ASP.NET Web Application
 - Click "Change Authentication"
 - Select the "Organisational Accounts" radio button
 - In the "Cloud - Single Organisation" drop down - select "On-Premises"
 - Under "On-Premises Authority", enter the ADFS Metadata URL
 - Under "App ID URI", type the identifier or leave blank for default
 - Click "OK"
 - Back on the "New ASP.NET Project" screen, Authentication should say "Organisational Auth (On-Premises)"
 - Click OK
 - Done
 
When the project is created, you'll see the web.config has been updated.
Enjoy!